code wiki / sequence
topic: sequence
8 modules sharing the sequence name family (derived from the tree's prefix discipline).
| module | description | lines | funcs |
|---|---|---|---|
| nx_sequence.nx | foundational DNA / RNA sequence algebra primitive. | 243 | 11 |
| nx_sequence_ambig.nx | N / IUPAC ambiguity sidecar for nx_sequence. | 151 | 4 |
| nx_sequence_ambig_test.nx | KAT for N sidecar bitset. | 137 | 1 |
| nx_sequence_edit.nx | Levenshtein edit distance for byte sequences. | 119 | 2 |
| nx_sequence_edit_test.nx | KAT for Levenshtein edit distance. | 93 | 2 |
| nx_sequence_fm.nx | FM-index construction + backward-search count. | 239 | 7 |
| nx_sequence_fm_test.nx | KAT for FM-index construction + backward search. | 168 | 1 |
| nx_sequence_kat_test.nx | G0.1 KAT for the DNA sequence primitive. | 201 | 1 |