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nx_peptide_identify_test.nx

buildroot/runtime/nx_peptide_identify_test.nx

8945 B156 linesdepth 7pulls 8 transitivereach 0 importersview sourcekind gate/prooftopic peptide
docsdependenciesstructsconstsfunctions

about

nx_peptide_identify_test.nx -- gate for the end-to-end identification capstone. The liar-kill is the pair T1/T4: a REAL spectrum identifies the right prohibited peptide confidently, and NOISE identifies nothing. A screen that named noise would be a liar generator; this refuses. expect_exit: 0 license_tier: ORIGINAL

dependencies 5 imports · 0 importers

nx_syscalls.nx nx_peptide.nx nx_peptide_deconv.nx nx_supplement_screen.nx nx_peptide_identify.nx nx_peptide_identify_test.nx

imports: nx_syscalls.nxnx_peptide.nxnx_peptide_deconv.nxnx_supplement_screen.nxnx_peptide_identify.nx

imported by: nobody (leaf or entry point)

call flow from main pre-order; caps 40 nodes / depth 6 declared; ↻ = already shown

main sys_mmap nxa_die sys_write sys_exit nxa_lock_take nxa_lock_addr sys_write ↻ nxa_lock_give nxa_lock_addr ↻ nxa_report_overrun sys_write ↻ nxa_dump_printable sys_write ↻ nxa_dump_sizes sys_write ↻ make_ladder sup_mz_q4 sup_mass_q4 sup_seq pep_mass_mono_q4 pep_seq_valid pep_len pep_aa_from_char pep_len ↻ pep_aa_from_char ↻ pep_residue_mono_q4 sup_mod sup_mod_delta_q4 pep_mz_q4 nx_identify_spectrum nx_ident_result_new sys_mmap ↻ deconv_from_list deconv_mass_verified deconv_pair_consistent deconv_charge_hi deconv_predict_mz deconv_neutral_mass deconv_charge_hi ↻

structs

none

consts

none

functions

12func t_puts(s: *u8) -> i64 { var n: i64 = 0; while s[n] != (0 as u8) { n = n + 1 } sys_write(1, s, n); return 0 }
called by 1: main calls 1: sys_write
13func t_putn(v: i64) -> i64 { let bb: *u8 = sys_mmap(28); var m: i64 = v; if m < 0 { m = 0 - m; sys_write(1, "-" as *u8, 1) } let t: *u8 = sys_mmap(28); var k: i64 = 0; if m == 0 { t[0] = 48 as u8; k = 1 } while m > 0 { t[k] = (48 + (m % 10)) as u8; m = m / 10; k = k + 1 } var i: i64 = 0; while i < k { bb[i] = t[k - 1 - i]; i = i + 1 } sys_write(1, bb, k); return 0 }
called by 1: main calls 2: sys_mmapsys_write
15func t_streq(a: *u8, b: *u8) -> i64 { var i: i64 = 0; while 1 == 1 { if a[i] != b[i] { return 0 } if a[i] == (0 as u8) { return 1 } i = i + 1 } return 1 }
called by 1: main
18func make_ladder(id: i64, out: *i64) -> i64
called by 1: main calls 1: sup_mz_q4
25func main() -> i64