code wiki / (root) / nx_peptide_test.nx

nx_peptide_test.nx

buildroot/runtime/nx_peptide_test.nx

9404 B166 linesdepth 4pulls 4 transitivereach 0 importersview sourcekind gate/prooftopic peptide
docsdependenciesstructsconstsfunctions

about

nx_peptide_test.nx -- gate for nx_peptide. Liar-killing where possible: the mass tests are checked against PUBLISHED masses of real peptides (angiotensin II, bradykinin), not against our own arithmetic, and the bisection's monotonicity PRECONDITION is measured rather than assumed. expect_exit: 0 license_tier: ORIGINAL

dependencies 2 imports · 0 importers

nx_syscalls.nx nx_peptide.nx nx_peptide_test.nx

imports: nx_syscalls.nxnx_peptide.nx

imported by: nobody (leaf or entry point)

call flow from main pre-order; caps 40 nodes / depth 6 declared; ↻ = already shown

main pep_mass_mono_q4 pep_seq_valid pep_len pep_aa_from_char pep_len ↻ pep_aa_from_char ↻ pep_residue_mono_q4 t_puts sys_write t_putn sys_mmap nxa_die sys_write ↻ sys_exit nxa_lock_take nxa_lock_addr sys_write ↻ nxa_lock_give nxa_lock_addr ↻ nxa_report_overrun sys_write ↻ nxa_dump_printable sys_write ↻ nxa_dump_sizes sys_write ↻ sys_write ↻ pep_mass_avg_q4 pep_seq_valid ↻ pep_len ↻ pep_aa_from_char ↻ pep_residue_avg_q4 pep_mass_agrees pep_seq_valid ↻ pep_mz_q4 pep_b_ion_q4 pep_seq_valid ↻ pep_len ↻ pep_aa_from_char ↻ pep_residue_mono_q4 ↻

structs

none

consts

none

functions

9func t_puts(s: *u8) -> i64 { var n: i64 = 0; while s[n] != (0 as u8) { n = n + 1 } sys_write(1, s, n); return 0 }
called by 1: main calls 1: sys_write
10func t_putn(v: i64) -> i64 { let bb: *u8 = sys_mmap(28); var m: i64 = v; if m < 0 { m = 0 - m; sys_write(1, "-" as *u8, 1) } let t: *u8 = sys_mmap(28); var k: i64 = 0; if m == 0 { t[0] = 48 as u8; k = 1 } while m > 0 { t[k] = (48 + (m % 10)) as u8; m = m / 10; k = k + 1 } var i: i64 = 0; while i < k { bb[i] = t[k - 1 - i]; i = i + 1 } sys_write(1, bb, k); return 0 }
called by 1: main calls 2: sys_mmapsys_write
12func main() -> i64
calls 20: pep_mass_mono_q4t_putst_putnpep_mass_avg_q4pep_mass_agreespep_seq_valid+14